snnib.io.brian22snnib

snnib.io.brian22snnib(net: Network, t_sim: Quantity, dt: Quantity, save: str = False, seed: int = None)

saves net to snnib compatible json file

• function to convert brian2 network to a file that can be imported using SNNIB

  • uses net to obtain network elements (synapses, neurons, spiketrains)

  • generates random 3d coordinates $

ec x in [-1,1]$ for each neuron

• removes units (stores them separately)

• extracts some simulation metadata

Parameters

• net

  • brian2.Network

  • the network object to convert to SNNIB format

• t_sim

  • brian2.Quantity

  • simulation time of the brian2 simulation

• dt

  • brian2.Quantity

  • time-step of the brian2 simulation

• save

  • str, optional

  • file to save the result to

  • the default is False

    • result not saved

Raises

Returns

• snnib_obj

  • dict

  • json

  • generated object that is compatible with SNNIB

Dependencies

• brian2

• json

• logging